Genome sc|0000472

Genomics

Accession

NCBI Assembly:GCA_030408505.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.05%
• Contamination: 0.9%
• Quality: 86.55

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 96.0%)
• tRNAs for 20 amino acids

Sequencing depth

26.0 ×

Source

• SRA: SRR2043156

Other features

• G+C Content: 45.53%
• Coding Density: 93.42%
• Codon Table: 11
• N50: 1,168,685 bp
• Contigs: 4
• Largest Contig: 1,168,685 bp
• Assembly Length: 1,734,283 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

See full comment

Automated checks

Complete

Sample Metadata

Date

Not detected

Location

Not detected

Toponym

Geo Loc Name: China: Dalian

Environment

Env Material: marine water

Other

Not detected

Package

Ncbi Submission Package: MIGS.eu.5.0

Biosamplemodel: MIGS.eu

All retrieved samples

• SRS947800: MIGS Eukaryotic sample from Saccharina japonica

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Metadata retrieved 10 months ago