Sulfomarinibacter kjeldsenii^Ts

Citation

Formal styling

Sulfomarinibacter kjeldsenii^Ts Flieder et al., 2021 (valid 2024)

Effective publication

Flieder et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:y7dk2-qc (validated)

Canonical URL

https://seqco.de/i:23536

Nomenclature

Rank

Species

Syllabication

kjeld.se'ni.i.

Etymology

N.L. gen. n. kjeldsenii, named after Kasper Urup Kjeldsen

Nomenclatural type

NCBI Assembly: GCA_014764525.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

MAG accession number | JACXWC000000000
Genome status1 | Draft
Estimated genome size | 4.3 Mbp
GC mol% | 60,9
Country of origin | Norway
Region of origin | Svalbard
Source of sample | Marine sediment
Sampling date | July, 2016
Geographic location | Smeerenburgfjorden
Latitude | 79° 42.83N
Longitude | 11° 05.10E
Water depth | 211 m
Sediment depth | 5-15 cm
Sample temperature | − 1.7°C and + 1 to + 3°C,
Putative energy metabolism | Predicted ability to use cellulose, protein, cyanophycin, hydrogen and acetate. Possible ability to respire nitrous oxide, metal-oxides, tetrathionate, sulfur and sulfite/sulfate, or sulfur disproportionation.
Putative relation to oxygen | Anaerobe
Cell shape | Thin rods, ~2 x 0.5 microns, visualized by CARD-FISH.

Classification

Bacteria » Acidobacteriota » Thermoanaerobaculia » Thermoanaerobaculales » Sulfomarinibacteraceae » Sulfomarinibacter » Sulfomarinibacter kjeldsenii^Ts

Parent

Sulfomarinibacter gtdb

Genomics

Accession

NCBI Assembly:GCA_014764525.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.2%
• Contamination: 3.4%
• Quality: 74.2

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 14 amino acids

Source

• BioSample: SAMN15691665
• BioSample: SAMN15677121

Other features

• G+C Content: 60.9%
• Coding Density: 91.44%
• Codon Table: 11
• N50: 5,914 bp
• Contigs: 783
• Largest Contig: 59,750 bp
• Assembly Length: 3,935,293 bp
• Ambiguous Assembly Fraction: 0.36%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_014764525.1
• GTDB Tree: s__Sulfomarinibacter kjeldsenii
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Sulfomarinibacter kjeldsenii (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 11 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Loy, Alexander over 2 years ago

Submitted by

Loy, Alexander 12 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 11 months ago

Validated by

Palmer, Marike 11 months ago

Date of priority

2024-01-11 05:23 PM (UTC)