JSONPDF

Taenaricola geysiriTs

Citation

Formal styling
Taenaricola geysiriTs corrig. Seymour et al., 2023 (valid 2024)
Effective publication
Seymour et al., 2023
Corrigendum
In SeqCode Registry from “Taenaricola geyseris” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xqyhj6of (validated)
Canonical URL
https://seqco.de/i:23732

Nomenclature

Rank
Species
Syllabication
gey.si'ri
Etymology
N.L. gen. n. geysiri, of or from a geyser, derived from the Icelandic Geysir
Nomenclatural type
NCBI Assembly: GCA_002781985.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This species is the type for the genus Taenaricola. The genomes of this species is predicted to be 1.2 to 1.4 Mb, with % GC content of 42.51 to 42.8%. Genes related to acetogenesis and an Rnf complex are present. No components for respiratory complexes are present in the genomes. A conductive pilin and components involved in the production of a Type-4a pilus are encoded by the genomes. A membrane-bound Group 4g [NiFe] hydrogenase is encoded by the genomes belonging to this species. All genome assemblies available for this species originate from Crystal Geyser, near Green River, Utah, USA, where a temperature of 17.4 °C was recorded. The nomenclatural type for the species is the genome GCA_002781985.1.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » Taenaricolales » Taenaricolaceae » Taenaricola » Taenaricola geysiriTs
Parent
Taenaricola gtdb
Pseudonyms
  • Taenaricola geyseris (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_002781985.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.57%
  • Contamination: 0.41%
  • Quality: 94.52
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 18 amino acids
Source
Other features
  • G+C Content: 42.71%
  • Coding Density: 93.64%
  • Codon Table: 11
  • N50: 16,523 bp
  • Contigs: 152
  • Largest Contig: 53,602 bp
  • Assembly Length: 1,274,469 bp
  • Ambiguous Assembly Fraction: 0.21%
Submitter comments
Completeness and contamination estimated with CheckM v. 2.
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Palmer, Marike about 2 years ago
Submitted by
Palmer, Marike 5 months ago
Curators
Validated by
Rodriguez-R, Luis M 18 days ago
Date of priority
2024-07-12 07:11 PM (UTC)

Publications
1

Citation Title
Seymour et al., 2023, Nature Microbiology Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license