Desulfosporosinus nitrosoreducens

Citation

Formal styling

Desulfosporosinus nitrosoreducens He et al., 2024

Effective publication

He et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tf-glp88 (validated)

Canonical URL

https://seqco.de/i:32619

Nomenclature

Rank

Species

Syllabication

ni.tro.so.re.du'cens

Etymology

L. masc. adj. nitrosus, full of natron, here intended to mean nitrous oxide; L. pres. part. reducens, converting to a different state; N.L. part. adj. nitrosoreducens, refers to the capability of nitrous oxide reduction

Nomenclatural type

NCBI Assembly: GCA_030954495.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

A novel acidophilic Desulfosporosinus species respiring N2O at pH 4.5. No N2O reduction at or above pH 7. 

Classification

Bacteria » Bacillota » Clostridia » Eubacteriales » Peptococcaceae » Desulfosporosinus » Desulfosporosinus nitrosoreducens

Parent

Desulfosporosinus

Genomics

Accession

NCBI Assembly:GCA_030954495.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.5%
• Contamination: 4.8%
• Quality: 75.5

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 3 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

15103.0 ×

Source

• BioSample: SAMN35436754

Other features

• G+C Content: 44.0%
• Coding Density: 83.39%
• Codon Table: 11
• N50: 116,337 bp
• Contigs: 84
• Largest Contig: 324,436 bp
• Assembly Length: 5,591,411 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

The genome was obtained via sequencing of a highly enriched culture. Genome completeness and contamination were estimated using CheckM.

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_030954495.1
• Wikispecies: Desulfosporosinus nitrosoreducens (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 4 months ago
• Submission process status
• Quality checks before valid publication

Registered by

He, Guang over 1 year ago

Submitted by

He, Guang 11 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Chuvochina, Maria (nomenclature)

Endorsed by

Chuvochina, Maria 11 months ago

Validated by

Rodriguez-R, Luis M 4 months ago

Date of priority

2024-08-28 06:19 PM (UTC)