Amarolinea dominans

Citation

Formal styling

Amarolinea dominans Petriglieri et al., 2023 (valid 2024)

Effective publication

Petriglieri et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:82uy5hy3 (validated)

Cannonical URL

https://seqco.de/i:44002

Nomenclature

Rank

Species

Syllabication

do'mi.nans

Etymology

L. part. adj. dominans, indicating the high abundance in sewage sludge

Nomenclatural type

NCBI Assembly: GCA_016719785.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

A species of filamentous bacteria abundant in activated sludge globally. 

Classification

Bacteria » Chloroflexota » Anaerolineae » “Amarolineales” » Amarolineaceae » Amarolinea » Amarolinea dominans

Parent

Amarolinea assigned in Andersen et al., 2019

Genomics

Accession

NCBI Assembly:GCA_016719785.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.73%
• Contamination: 0.64%
• Quality: 89.53

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

16.0 ×

Source

• BioSample: SAMN16426226
• BioSample: SAMN14825708

Other features

• G+C Content: 62.59%
• Coding Density: 87.62%
• Codon Table: 11
• N50: 337,034 bp
• Contigs: 35
• Largest Contig: 775,720 bp
• Assembly Length: 6,591,815 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCA_016719785.1

Search sequences

• NCBI Nucleotide

Local history

• This name was last modified 11 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Petriglieri, Francesca 4 months ago

Submitted by

Petriglieri, Francesca 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)
• Valero Tebar, Juan

Validated by

Rodriguez-R, Luis M 11 days ago

Date of priority

2024-04-26 11:27 AM (UTC)