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Caldilinea saccharophila

Citation

Formal styling
Caldilinea saccharophila Petriglieri et al., 2023 (valid 2024)
Effective publication
Petriglieri et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:82uy5hy3 (validated)
Canonical URL
https://seqco.de/i:44005

Nomenclature

Rank
Species
Syllabication
sac.cha.ro'phi.la
Etymology
Gr. neut. n. saccharon, sugar; Gr. masc. n. philos, lover; N.L. fem. adj. saccharophila, indicating a preference for sugars as carbon sources
Nomenclatural type
NCBI Assembly: GCA_016710365.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species established on the basis of MiGA taxonomic novelty analyses, ANI, 16S rRNA gene phylogenetic reconstruction, FISH and phylogenomic analyses.
Classification
Bacteria » Chloroflexota » Caldilineae » Caldilineales » Caldilineaceae » Caldilinea » Caldilinea saccharophila
Parent
Caldilinea gtdb

Genomics

Accession
NCBI Assembly:GCA_016710365.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.73%
  • Contamination: 1.82%
  • Quality: 88.63
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 17 amino acids
Sequencing depth
8.4 ×
Source
Other features
  • G+C Content: 60.66%
  • Coding Density: 86.41%
  • Codon Table: 11
  • N50: 172,279 bp
  • Contigs: 68
  • Largest Contig: 510,391 bp
  • Assembly Length: 6,608,906 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Petriglieri, Francesca 8 months ago
Submitted by
Petriglieri, Francesca 6 months ago
Curators
Validated by
Rodriguez-R, Luis M 5 months ago
Date of priority
2024-04-26 11:27 AM (UTC)

Publications
1

Citation Title
Petriglieri et al., 2023, mSystems A comprehensive overview of the Chloroflexota community in wastewater treatment plants worldwide
Effective publication


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