Raskinella chloraquaticus^Ts

Citation

Formal styling

Raskinella chloraquaticus^Ts Sudarshan et al., 2024

Effective publication

Sudarshan et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:sd2bsaye (validated)

Canonical URL

https://seqco.de/i:46680

Nomenclature

Rank

Species

Syllabication

chlor.a.qua'ti.cus

Etymology

N.L. neut. n. chlorum, chlorine; L. masc. adj. aquaticus, of or from water; N.L. masc. n. chloraquaticus, relating to chlorinated water

Nomenclatural type

NCBI Assembly: GCA_002365175.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Raskinella Chlorumaquaticus is a globally prevalent and abundant species that has been identified within disinfected drinking water systems. It is part of a unclassified genus "Raskinella" under the family Phreatobacteraceae.

Classification

Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Phreatobacteraceae » Raskinella » Raskinella chloraquaticus^Ts

Parent

Raskinella

Pseudonyms

• UBA4765 (Alphanumeric placeholder accession)

Genomics

Accession

NCBI Assembly:GCA_002365175.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.1%
• Contamination: 0.9%
• Quality: 94.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

112.7 ×

Source

• BioSample: SAMN06452415
• BioSample: SAMN00829210

Other features

• G+C Content: 60.94%
• Coding Density: 91.58%
• Codon Table: 11
• N50: 115,932 bp
• Contigs: 45
• Largest Contig: 247,659 bp
• Assembly Length: 3,049,650 bp
• Ambiguous Assembly Fraction: 0.031%

Automated checks

Complete

See additional details

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Last modified 5 months ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_002365175.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Raskinella chloraquaticus

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 7 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Sudarshan, Ashwin, created 11 months ago

Submitted by

Sudarshan, Ashwin 10 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Rodriguez-R, Luis M 10 months ago

Validated by

Palmer, Marike 7 months ago

Date of priority

2024-09-10 02:51 PM (UTC)