JSONPDF

Dormibacter inghamiae

Citation

Formal styling
Dormibacter inghamiae Montgomery et al., 2021 (valid 2024)
Effective publication
Montgomery et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:acset5a1 (validated)
Canonical URL
https://seqco.de/i:49053

Nomenclature

Rank
Species
Syllabication
ingh.am'i.ae
Etymology
N.L. gen. n. inghamiae, in honor of Susan Ingham, a Australian Subantarctic voyager, pioneer of subantarctic research on wildlife
Nomenclatural type
NCBI Assembly: GCA_016464725.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Based on phylogenomic analysis of 120 concatenated single copy proteins. MSA was generated with GTDB-Tk v1.3.0 and tree was reconstructed with RaxML v8.2.12.
Classification
Bacteria » Dormibacterota » “Dormibacteria” » “Dormibacterales” » “Dormibacteraceae” » Dormibacter » Dormibacter inghamiae
Parent
Dormibacter

Genomics

Accession
NCBI Assembly:GCA_016464725.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.83%
  • Contamination: 0.77%
  • Quality: 88.98
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 48.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
14.0 ×
Source
Other features
  • G+C Content: 66.5%
  • Coding Density: 89.45%
  • Codon Table: 11
  • N50: 148,416 bp
  • Contigs: 40
  • Largest Contig: 352,400 bp
  • Assembly Length: 3,101,761 bp
  • Ambiguous Assembly Fraction: 0.00097%
Submitter comments
Completeness estimated with CheckM2
Automated checks
Complete
See additional details
Last modified 29 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Ferrari, Belinda 3 months ago
Submitted by
Ferrari, Belinda 3 months ago
Curators
Validated by
Rodriguez-R, Luis M 29 days ago
Date of priority
2024-10-04 01:30 AM (UTC)

Publications
2

Citation Title
Oren, 2022, International Journal of Systematic and Evolutionary Microbiology Candidatus List No. 4: Lists of names of prokaryotic Candidatus taxa
Montgomery et al., 2021, Environmental Microbiology Persistence and resistance: survival mechanisms of Candidatus Dormibacterota from nutrient‐poor Antarctic soils
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license