JSON

Genome sc|0001013

Name

Methanimicrococcus hongohii

Database

NCBI Assembly

Accession

GCA_032594095.1

Genomics

Accession
NCBI Assembly:GCA_032594095.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 3 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
143.0 ×
Source
Other features
  • G+C Content: 43.0%
  • Coding Density: 75.43%
  • Codon Table: 11
  • N50: 2,193,213 bp
  • Contigs: 1
  • Largest Contig: 2,193,213 bp
  • Assembly Length: 2,193,213 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 12 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011-10-01
Location
Lat Lon: 51.02836 N 13.47125 E
Toponym
Geo Loc Name: Germany
Environment
Env Broad Scale: terrestrial
Env Local Scale: digestive tract
Env Medium: gut content
Other
Host: Henschoutedenia flexivitta
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIGS.ba.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples
Metadata retrieved 12 days ago


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