Methanimicrococcus labiotermitis


Citation

Formal styling
Methanimicrococcus labiotermitis Protasov et al., 2023 (valid 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Cannonical URL
https://seqco.de/i:32597

Nomenclature

Rank
Species
Syllabication
la.bi.o.ter'mi.tis
Etymology
N.L. gen. n. labiotermitis, referring to Labiotermes, the host genus
Nomenclatural type
NCBI Assembly: GCA_009784005.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 45.5%, and the estimated genome size is 1.83 Mbp.
Classification
Archaea » Methanobacteriota » “Methanomicrobia” » Methanosarcinales » Methanosarcinaceae » Methanimicrococcus » Methanimicrococcus labiotermitis
Parent
Methanimicrococcus

Genomics

Accession
NCBI Assembly:GCA_009784005.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.14%
  • Contamination: 0.0%
  • Quality: 92.14
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
24.0 ×
Source
Other features
  • G+C Content: 45.53%
  • Coding Density: 79.54%
  • Codon Table: 11
  • N50: 43,757 bp
  • Contigs: 62
  • Largest Contig: 82,997 bp
  • Assembly Length: 1,688,578 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs. 
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii 10 months ago
Submitted by
Protasov, Evgenii 2 months ago
Curators
Validated by
Rodriguez-R, Luis M 18 days ago
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication



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