JSON

Genome sc|0000105

Name

“Aquincolibacterium aerophilum”

Database

NCBI Assembly

Accession

GCA_903884815.1

Genomics

Accession
NCBI Assembly:GCA_903884815.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.02%
  • Contamination: 0.62%
  • Quality: 93.92
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 52.72%
  • Coding Density: 92.21%
  • Codon Table: 11
  • N50: 62,682 bp
  • Contigs: 80
  • Largest Contig: 184,991 bp
  • Assembly Length: 2,871,782 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM v.2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-08-22
Location
Geographic Location Latitude: 61.20805555555556
Geographic Location Longitude: 25.11388888888889
Toponym
Geographic Location Country And Or Sea: Finland
Environment
Isolation Source: lake water
Environment Biome: lentic water body
Environment Feature: lake
Other
Temperature: 4.6
Geographic Location Depth: 5.5
Package
Ena Checklist: ERC000047 • ERC000024
All retrieved samples
Metadata retrieved 4 months ago


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