JSON

Genome sc|0000125

Name

“Fredricksoniimonas aquilentivivens”

Database

NCBI Assembly

Accession

GCA_903860135.1

Genomics

Accession
NCBI Assembly:GCA_903860135.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.09%
  • Contamination: 1.51%
  • Quality: 89.54
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 50.78%
  • Coding Density: 93.76%
  • Codon Table: 11
  • N50: 197,393 bp
  • Contigs: 20
  • Largest Contig: 343,315 bp
  • Assembly Length: 2,026,200 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM v. 2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-09-07
Location
Geographic Location Latitude: 64.1503888888889
Geographic Location Longitude: 18.799750000000003
Toponym
Geographic Location Country And Or Sea: Sweden
Environment
Isolation Source: lake water
Environment Biome: lentic water body
Environment Feature: lake
Other
Ph: 6.19
Temperature: 5.3
Geographic Location Depth: 5
Package
Ena Checklist: ERC000047 • ERC000024
All retrieved samples
Metadata retrieved 4 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license