JSON

Genome sc|0000126

Name

“Fredricksoniimonas borealis”

Database

NCBI Assembly

Accession

GCA_903901225.1

Genomics

Accession
NCBI Assembly:GCA_903901225.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.54%
  • Contamination: 0.55%
  • Quality: 93.79
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 54.59%
  • Coding Density: 93.79%
  • Codon Table: 11
  • N50: 69,321 bp
  • Contigs: 49
  • Largest Contig: 201,535 bp
  • Assembly Length: 2,378,232 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM v. 2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-09-05
Location
Geographic Location Latitude: 61.23083333333334
Geographic Location Longitude: 25.142222222222223
Toponym
Geographic Location Country And Or Sea: Finland
Environment
Isolation Source: lake water
Environment Biome: lentic water body
Environment Feature: lake
Other
Ph: 6.02
Temperature: 5.8
Geographic Location Depth: 2.8
Package
Ena Checklist: ERC000047 • ERC000024
All retrieved samples
Metadata retrieved 4 months ago


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