Genome sc|0001352


Database

NCBI Assembly

Accession

GCA_031279415.1

Genomics

Accession
NCBI Assembly:GCA_031279415.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.69%
  • Contamination: 0.0%
  • Quality: 97.69
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 58.0%)
  • 1 23S rRNA (up to 7.0%)
  • tRNAs for 19 amino acids
Sequencing depth
98.0 ×
Source
Other features
  • G+C Content: 36.3%
  • Coding Density: 90.83%
  • Codon Table: 11
  • N50: 64,079 bp
  • Contigs: 46
  • Largest Contig: 266,684 bp
  • Assembly Length: 2,009,061 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 4 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017-07-19
Location
Lat Lon: 16.510183 N 61.465800 W
Toponym
Geo Loc Name: Guadeloupe: Pointe de la Grande Vigie, Guadeloupe, France • France: Pointe de la Grande Vigie, Guadeloupe, France
Environment
Sample Type: metagenomic assembly
Isolation Source: termite gut
Env Broad Scale: terrestrial biome
Env Local Scale: woodland biome
Env Medium: tropical woodland biome
Other
Host: Procryptotermes leewardensis
Package
Biosamplemodel: MIMAG.host-associated • MIGS/MIMS/MIMARKS.host-associated
All retrieved samples

Metadata retrieved 4 days ago

Sequencing Experiments

Metagenome of Procryptotermes leewardensis : gut microbiota


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