Genome sc|0001628

Name

“Mangrovimarina plasticivorans”

Database

NCBI Assembly

Accession

GCA_963966365.1

Genomics

Accession

NCBI Assembly:GCA_963966365.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 99.0%
Contamination: 0.5%
Quality: 96.5

Ribosomal and transfer RNA genes

0 16S rRNAs
0 23S rRNAs
tRNAs for 20 amino acids

Sequencing depth

2773.0 ×

Source

BioSample: PRJEB72453

Other features

G+C Content: 62.83%
Coding Density: 89.58%
Codon Table: 11
N50: 265,208 bp
Contigs: 29
Largest Contig: 757,624 bp
Assembly Length: 4,603,441 bp
Ambiguous Assembly Fraction: 0.0%

Submitter comments

CheckM v1.2.2

Automated checks

Complete

Sample Metadata

Date

Not detected

Location

Not detected

Toponym

Not detected

Environment

Isolation Source: primary_s_L_Retroauricular crease (RAC_L)

Analyte Type: primary_s_L_Retroauricular crease (RAC_L)

Other

Not detected

Package

Ncbi Package: Generic.1.0

All retrieved samples

PRJEB72453: Human metagenome sample from primary_s_L_Retroauricular crease (RAC_L) of a male participant in the dbGaP study "HMP Core Microbiome Sampling Protocol A (HMP-A)"

Metadata retrieved 3 months ago

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