Mangrovimarina plasticivoransTs


Citation

Formal styling
Mangrovimarina plasticivoransTs Jiménez et al., 2024
Effective publication
Jiménez et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:ayug-nu6 (validated)
Canonical URL
https://seqco.de/i:44055

Nomenclature

Rank
Species
Syllabication
plas.ti.ci.vo'rans
Etymology
N.L. neut. n. plasticum, plastic; L. pres. part. vorans, devouring, destroying; N.L. part. adj. plasticivorans, plastic-devouring referring to ability of organism to catabolize the plastic
Nomenclatural type
NCBI Assembly: GCA_963966365.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species established on the basis of MiGA taxonomic novelty analyses, ANI, AAI, phylogenomic tree, and the type material is the genome MAG11A_P8. The MAG was reconstructed from PET-transforming bacterial consortium and encoded for two putative monohydroxyethyl terephthalate hydrolases. In addition, genes involved in PET-monomers catabolism were found within the genome.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Rhizobiaceae » Mangrovimarina » Mangrovimarina plasticivoransTs
Parent
Mangrovimarina

Genomics

Accession
NCBI Assembly:GCA_963966365.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.0%
  • Contamination: 0.5%
  • Quality: 96.5
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
2773.0 ×
Source
Other features
  • G+C Content: 62.83%
  • Coding Density: 89.58%
  • Codon Table: 11
  • N50: 265,208 bp
  • Contigs: 29
  • Largest Contig: 757,624 bp
  • Assembly Length: 4,603,441 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM v1.2.2
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Jimenez, Diego 8 months ago
Submitted by
Jimenez, Diego 6 months ago
Curators
Endorsed by
Rodriguez-R, Luis M 5 months ago
Validated by
Palmer, Marike about 1 month ago
Date of priority
2024-09-30 02:00 PM (UTC)

Publications
1

Citation Title
Jiménez et al., 2024, Trends in Biotechnology Engineering the mangrove soil microbiome for selection of polyethylene terephthalate-transforming bacterial consortia
Effective publication



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