JSON

Genome sc|0002360

Name

Nitrosomaritimum aestuariiTs

Database

NCBI Assembly

Accession

GCA_013867335.1

Genomics

Accession
NCBI Assembly:GCA_013867335.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.63%
  • Contamination: 0.97%
  • Quality: 90.78
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 4 23S rRNAs (up to 42.0%)
  • tRNAs for 18 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 34.88%
  • Coding Density: 89.7%
  • Codon Table: 11
  • N50: 15,420 bp
  • Contigs: 184
  • Largest Contig: 52,801 bp
  • Assembly Length: 1,460,734 bp
  • Ambiguous Assembly Fraction: 0.097%
Submitter comments
CheckM
Automated checks
Complete
Last modified 4 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-12-14
Location
Lat Lon: 24.39 N 117.92 E
Toponym
Geo Loc Name: China: Jiulong River estuary
Environment
Sample Type: metagenomic assembly
Isolation Source: estuarine sediment • estuary sediment
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples
Metadata retrieved 4 days ago


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