Nitrosomaritimum khambatense

Citation

Formal styling

Nitrosomaritimum khambatense corrig. Zhao et al., 2024

Effective publication

Zhao et al., 2024

Corrigendum

In SeqCode Registry from “Nitrosomaritimum khambatensis” (sic)

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:bzk8d90a (validated)

Canonical URL

https://seqco.de/i:48842

Nomenclature

Rank

Species

Syllabication

kham.ba.ten'se

Etymology

N.L. neut. adj. khambatense, of Khambat, referring to this organism first identified in the Gulf of Khambhat

Nomenclatural type

NCBI Assembly: GCA_011773785.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The "khambatensis" indicates the first metagenome-assembled genome (MAG) of this species was recovered from deep marine sediments in the Gulf of Khambhat.

Classification

Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosomaritimum » Nitrosomaritimum khambatense

Parent

Nitrosomaritimum

Pseudonyms

• Nitrosomaritimum khambatensis (Original, corrected name)

Genomics

Accession

NCBI Assembly:GCA_011773785.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.12%
• Contamination: 1.94%
• Quality: 86.42

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 26.0%)
• 1 23S rRNA (up to 0.0%)
• tRNAs for 17 amino acids

Sequencing depth

568.1 ×

Source

• BioSample: SAMN13684380
• BioSample: SAMN13742134

Other features

• G+C Content: 34.77%
• Coding Density: 90.14%
• Codon Table: 11
• N50: 59,249 bp
• Contigs: 42
• Largest Contig: 120,693 bp
• Assembly Length: 1,370,394 bp
• Ambiguous Assembly Fraction: 0.3%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_011773785.1
• Wikispecies: Nitrosomaritimum khambatense (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 2 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Zhao, Ze 4 months ago

Submitted by

Zhao, Ze 3 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 2 months ago

Date of priority

2024-09-27 01:59 PM (UTC)