Nitrosomaritimum khambatense


Citation

Formal styling
Nitrosomaritimum khambatense corrig. Zhao et al., 2024
Effective publication
Zhao et al., 2024
Corrigendum
In SeqCode Registry from “Nitrosomaritimum khambatensis” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:bzk8d90a (validated)
Canonical URL
https://seqco.de/i:48842

Nomenclature

Rank
Species
Syllabication
kham.ba.ten'se
Etymology
N.L. neut. adj. khambatense, of Khambat, referring to this organism first identified in the Gulf of Khambhat
Nomenclatural type
NCBI Assembly: GCA_011773785.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The "khambatensis" indicates the first metagenome-assembled genome (MAG) of this species was recovered from deep marine sediments in the Gulf of Khambhat.
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosomaritimum » Nitrosomaritimum khambatense
Parent
Nitrosomaritimum
Pseudonyms
  • Nitrosomaritimum khambatensis (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_011773785.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.12%
  • Contamination: 1.94%
  • Quality: 86.42
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 26.0%)
  • 1 23S rRNA (up to 0.0%)
  • tRNAs for 17 amino acids
Sequencing depth
568.1 ×
Source
Other features
  • G+C Content: 34.77%
  • Coding Density: 90.14%
  • Codon Table: 11
  • N50: 59,249 bp
  • Contigs: 42
  • Largest Contig: 120,693 bp
  • Assembly Length: 1,370,394 bp
  • Ambiguous Assembly Fraction: 0.3%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Zhao, Ze 2 months ago
Submitted by
Zhao, Ze about 1 month ago
Curators
Validated by
Rodriguez-R, Luis M 24 days ago
Date of priority
2024-09-27 01:59 PM (UTC)

Publications
1

Citation Title
Zhao et al., 2024, Environmental Science & Technology Discovery of Candidatus Nitrosomaritimum as a New Genus of Ammonia-Oxidizing Archaea Widespread in Anoxic Saltmarsh Intertidal Aquifers
Effective publication



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