Genome sc|0003514

Genomics

Accession

NCBI Assembly:GCF_021555155.1

Cultures

Strain sc|0038879

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 99.1%
• Contamination: 0.9%
• Quality: 94.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

200.0 ×

Source

• BioSample: SAMN24424999

Other features

• G+C Content: 64.9%
• Coding Density: 88.81%
• Codon Table: 11
• N50: 47,105 bp
• Contigs: 201
• Largest Contig: 129,904 bp
• Assembly Length: 5,204,801 bp
• Ambiguous Assembly Fraction: 0.2%

Automated checks

Complete

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Last modified 9 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN24424999

Date

Collection Date: 2020-11

Location

Not detected

Toponym

Geo Loc Name: China: Alar

Environment

Sample Type: pure culture

Isolation Source: nodules

Other

Host: Lotus japonicus

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN24424999: Microbe sample from R.alarensis

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Metadata retrieved 9 days ago