Genome sc|0003517

Genomics

Accession

NCBI Assembly:GCF_021648825.1

Cultures

Strain sc|0038882

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 99.1%
• Contamination: 2.8%
• Quality: 85.1

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

200.0 ×

Source

• BioSample: SAMN24425000

Other features

• G+C Content: 60.7%
• Coding Density: 88.55%
• Codon Table: 11
• N50: 363,191 bp
• Contigs: 41
• Largest Contig: 916,787 bp
• Assembly Length: 4,355,797 bp
• Ambiguous Assembly Fraction: 0.0023%

Automated checks

Complete

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Last modified 9 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN24425000

Date

Collection Date: 2020-11

Location

Not detected

Toponym

Geo Loc Name: China:Alar

Environment

Sample Type: pure culture

Isolation Source: rhizosphere

Other

Host: Lotus

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN24425000: Microbe sample from R. halophilensis

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Metadata retrieved 9 days ago