Genome sc|0000356


Database

NCBI Assembly

Accession

GCA_028532855.1

Genomics

Accession
NCBI Assembly:GCA_028532855.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.0%
  • Contamination: 2.3%
  • Quality: 82.5
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 43.93%
  • Coding Density: 92.98%
  • Codon Table: 11
  • N50: 120,296 bp
  • Contigs: 53
  • Largest Contig: 535,156 bp
  • Assembly Length: 3,835,059 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
No 16S rRNA sequence detected in the gene annotation  
Automated checks
Complete

Last modified 10 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2022-02-18
Location
Lat Lon: 9.2876 N 79.3129 E
Toponym
Geo Loc Name: India:Rameshwaram
Environment
Isolation Source: sargassum
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples

Metadata retrieved 10 days ago

Sequencing Experiments

metagenome of algae:sargassum


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