Thalassospirochaeta sargassiTs


Citation

Formal styling
Thalassospirochaeta sargassiTs Pragya et al., 2024
Effective publication
Pragya et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:jarzruyb (validated)
Canonical URL
https://seqco.de/i:31279

Nomenclature

Rank
Species
Syllabication
sar.gas'si
Etymology
N.L. gen. n. sargassi, of Sargassum, referring to the genus name of the brown algae
Nomenclatural type
NCBI Assembly: GCA_028532855.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
GC content is 43.93. Flagellated and obligate anaerobes. MEP pathway for terpenoid biosynthesis. vanT AMR genes present. 
Classification
Bacteria » Spirochaetota » Spirochaetia » Spirochaetales » Spirochaetaceae » Thalassospirochaeta » Thalassospirochaeta sargassiTs
Parent
Thalassospirochaeta

Genomics

Accession
NCBI Assembly:GCA_028532855.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.0%
  • Contamination: 2.3%
  • Quality: 82.5
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 43.93%
  • Coding Density: 92.98%
  • Codon Table: 11
  • N50: 120,296 bp
  • Contigs: 53
  • Largest Contig: 535,156 bp
  • Assembly Length: 3,835,059 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
No 16S rRNA sequence detected in the gene annotation  
Automated checks
Complete
See additional details

Last modified 9 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chintalapati, Venkata Ramana over 1 year ago
Submitted by
Chintalapati, Venkata Ramana about 1 year ago
Curators
Endorsed by
Rodriguez-R, Luis M about 1 year ago
Validated by
Palmer, Marike 4 months ago
Date of priority
2024-08-01 07:30 AM (UTC)

Publications
1

Citation Title
Pragya et al., 2024, Systematic and Applied Microbiology Phylogenomic analysis of metagenome-assembled genomes indicates new taxa in the order Spirochaetales and proposal of Thalassospirochaeta sargassi gen. nov. sp. nov. from seaweeds
Effective publication



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