Genome sc|0000390

Name

Planktomarina forsetii

Database

NCBI Assembly

Accession

GCA_951543265.1

Genomics

Accession

NCBI Assembly:GCA_951543265.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 96.74%
Contamination: 0.1%
Quality: 96.24

Ribosomal and transfer RNA genes

0 16S rRNAs
0 23S rRNAs
tRNAs for 19 amino acids

Sequencing depth

6.0 ×

Source

Other features

G+C Content: 51.0%
Coding Density: 88.79%
Codon Table: 11
N50: 114,268 bp
Contigs: 83
Largest Contig: 310,510 bp
Assembly Length: 3,018,224 bp
Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2016-05-12

Location

Lat Lon: 54.1841 N 7.9000 E

Toponym

Geo Loc Name: Atlantic Ocean: North Sea, Helgoland

Environment

Isolation Source: sea water • subsurface seawater from pelagic zone

Gold Ecosystem Classification: Environmental | Aquatic | Marine | Epipelagic | Unclassified

Other

Host: not applicable

Package

Ena Checklist: ERC000011

Ncbi Submission Package: Metagenome.environmental.1.0

Biosamplemodel: Metagenome or environmental

Additional Accessions

SRR7058482

All retrieved samples

Metadata retrieved 3 months ago

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