Genome sc|0000445

Genomics

Accession

NCBI Assembly:GCA_000742475.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 91.94%
• Contamination: 0.0%
• Quality: 91.94

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

927.0 ×

Source

• BioSample: SAMN02996437

Other features

• G+C Content: 49.75%
• Coding Density: 89.38%
• Codon Table: 11
• N50: 334,235 bp
• Contigs: 5
• Largest Contig: 376,171 bp
• Assembly Length: 1,115,609 bp
• Ambiguous Assembly Fraction: 0.083%

Automated checks

Complete

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Last modified 12 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN02996437

Date

Collection Date: 2012

Location

Not detected

Toponym

Not detected

Environment

Not detected

Other

Host: Penaeus vannamei

Package

Not detected

All retrieved samples

• SAMN02996437: MIGS Cultured Bacterial/Archaeal sample from Candidatus Hepatobacter penaei

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Metadata retrieved 12 days ago