Genome sc|0005389

Genomics

Accession

NCBI Assembly:GCA_004195025.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.2%
• Contamination: 0.9%
• Quality: 91.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 54.0%)
• 0 23S rRNAs
• tRNAs for 21 amino acids

Sequencing depth

244.0 ×

Source

• BioSample: SAMN10849840

Other features

• G+C Content: 29.89%
• Coding Density: 81.68%
• Codon Table: 11
• N50: 89,686 bp
• Contigs: 47
• Largest Contig: 322,929 bp
• Assembly Length: 2,459,539 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

---

Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN10849840

Date

Collection Date: 2016-07/2017-08

Location

Lat Lon: 23° 3′ N, 113° 10′ 12″ E

View map of sampling locations

Toponym

Geo Loc Name: China:Sun Yat-sen University,Guangzhou

Environment

Sample Type: metagenomic assembly

Isolation Source: acid mine drainage

Other

Not detected

Package

Not detected

All retrieved samples

• SAMN10849840: Microbe sample from Candidatus Acididesulfobacter diazotrophicus AP1

---

Metadata retrieved about 1 month ago