SeqCode Registry
cognitis nomina
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Genomes
sc|0000619
JSON
Genome sc|0000619
Name
Methanarmilla boviskoreani
Database
NCBI Assembly
Accession
GCF_000320505.1
Genomics
Accession
NCBI Assembly:
GCF_000320505.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.0%
Quality:
100.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 18 amino acids
Sequencing depth
34.0 ×
Source
BioSample: SAMD00036626
Other features
G+C Content:
28.98%
Coding Density:
77.79%
Codon Table:
11
N50:
107,381 bp
Contigs:
54
Largest Contig:
379,907 bp
Assembly Length:
2,045,801 bp
Ambiguous Assembly Fraction:
4.9e-05%
Submitter comments
Methanobrevibacter boviskoreani
Automated checks
Complete
Last modified
about 1 month ago
Sample Metadata
BioSample entries
BioSample: SAMD00036626
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ncbi Submission Package:
Generic.1.0
Biosamplemodel:
Generic
All retrieved samples
SAMD00036626
: Generic sample from Methanobrevibacter boviskoreani JH1
Metadata retrieved
about 1 month ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMD00036626
×
Metadata retrieved using the EBI API
BioSample Accession(s)
SAMD00036626
strain
JH1
type-material
type strain of Methanobrevibacter boviskoreani
NCBI submission package
Generic.1.0
organism
Methanobrevibacter boviskoreani JH1
sample_name
BAGX
BioSampleModel
Generic
ENA-FIRST-PUBLIC
2015-12-03
ENA-LAST-UPDATE
2015-12-02
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