Methanarmilla boviskoreani

Citation

Formal styling

Methanarmilla boviskoreani Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32441

Nomenclature

Rank

Species

Syllabication

bo.vis.ko.re.a'ni

Etymology

L. gen. n. bovis, cattle; N.L. masc. adj. koreanus, Korean; N.L. gen. masc. / fem. n. boviskoreani, of Korean cattle

Nomenclatural type

NCBI Assembly: GCF_000320505.1

Reference strain

JH1 = DSM 25824 = JCM 18376 = KCTC 4102

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Cells stain Gram-positive, occur singly or in pairs or chains and are rod-shaped (1.5–1.8 µm). Cells are non-motile. The optimum pH and temperature for growth are pH 6.5–7.0 and 37–40 °C. The maximum salt (NaCl) tolerance for growth is 0.5 M (as in Lee et al., 2013). The G+C content of the type genome is 28.9 mol%, and the genome size is 2.04 Mbp. 

Notes

With current grammatical usage, the spelling of the species epithet as "bovikoreani" would be preferred, however, as the basonym Methanobrevibacter boviskoreani is validly published under the ICNP, the original spelling of the species epithet was retained with reassignment to the genus Methanarmilla.

Classification

Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanarmilla » Methanarmilla boviskoreani

Parent

Methanarmilla

Alternative placements

• Methanobrevibacter assigned in Lee et al., 2013

Genomics

Accession

NCBI Assembly:GCF_000320505.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 18 amino acids

Sequencing depth

34.0 ×

Source

• BioSample: SAMD00036626

Other features

• G+C Content: 28.98%
• Coding Density: 77.79%
• Codon Table: 11
• N50: 107,381 bp
• Contigs: 54
• Largest Contig: 379,907 bp
• Assembly Length: 2,045,801 bp
• Ambiguous Assembly Fraction: 4.9e-05%

Submitter comments

Methanobrevibacter boviskoreani

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCF_000320505.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanarmilla boviskoreani (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 6 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii over 1 year ago

Submitted by

Protasov, Evgenii 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 7 months ago

Date of priority

2024-04-16 06:48 PM (UTC)