Benthicola marisminoris^Ts

Citation

Formal styling

Benthicola marisminoris^Ts Aldeguer-Riquelme et al., 2023

Effective publication

Aldeguer-Riquelme et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:0hkazsoc (validated)

Canonical URL

https://seqco.de/i:23797 CopyCopied to the clipboard

Nomenclature

Rank

Species

Syllabication

ma.ris.mi.no'ris

Etymology

N.L. gen. n. marisminoris, referring to the Mar Menor lagoon, the site of isolation, located in Murcia, Spain

Nomenclatural type

NCBI Assembly: GCA_023554335.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Classification

Bacteria » Gemmatimonadota » Gemmatimonadetes » Palauibacterales » Palauibacteraceae » Benthicola » Benthicola marisminoris^Ts

Parent

Benthicola gtdb

Genomics

Accession

NCBI Assembly:GCA_023554335.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 93.96%
• Contamination: 3.6%
• Quality: 75.96

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 1 23S rRNA (up to 100.0%)
• tRNAs for 17 amino acids

Source

• BioSample: SAMN09092635

Other features

• G+C Content: 66.45%
• Coding Density: 93.41%
• Codon Table: 11
• N50: 10,285 bp
• Contigs: 280
• Largest Contig: 62,930 bp
• Assembly Length: 2,573,992 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Genome quality has been evaluated with checkM, presence of 16S rRNA gene was checked with sortmerna and tRNA were identified using tRNAscan

Automated checks

Complete

See additional details

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Last modified 6 months ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_023554335.1
• GTDB Tree: s__Benthicola marisminoris
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Benthicola marisminoris

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified almost 2 years ago
• Submission process status
• Quality checks before valid publication

Registered by

Aldeguer-Riquelme, Borja, created over 2 years ago

Submitted by

Aldeguer-Riquelme, Borja about 2 years ago

Curators

• Rodriguez-R, Luis M
• Chuvochina, Maria

Endorsed by

Chuvochina, Maria about 2 years ago

Validated by

Chuvochina, Maria almost 2 years ago

Date of priority

2023-06-23 07:38 AM (UTC)