Benthicola marisminoris^Ts

Citation

Formal styling

Benthicola marisminoris^Ts Aldeguer-Riquelme et al., 2023

Effective publication

Aldeguer-Riquelme et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:0hkazsoc (validated)

Canonical URL

https://seqco.de/i:23797

Nomenclature

Rank

Species

Syllabication

ma.ris.mi.no'ris

Etymology

N.L. gen. n. marisminoris, referring to the Mar Menor lagoon, the site of isolation, located in Murcia, Spain

Nomenclatural type

NCBI Assembly: GCA_023554335.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Classification

Bacteria » Gemmatimonadota » Gemmatimonadetes » Palauibacterales » Palauibacteraceae » Benthicola » Benthicola marisminoris^Ts

Parent

Benthicola gtdb

Genomics

Accession

NCBI Assembly:GCA_023554335.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 93.96%
• Contamination: 3.6%
• Quality: 75.96

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 1 23S rRNA (up to 100.0%)
• tRNAs for 17 amino acids

Source

• BioSample: SAMN09092635

Other features

• G+C Content: 66.45%
• Coding Density: 93.41%
• Codon Table: 11
• N50: 10,285 bp
• Contigs: 280
• Largest Contig: 62,930 bp
• Assembly Length: 2,573,992 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Genome quality has been evaluated with checkM, presence of 16S rRNA gene was checked with sortmerna and tRNA were identified using tRNAscan

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_023554335.1
• GTDB Tree: s__Benthicola marisminoris
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Benthicola marisminoris (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified over 1 year ago
• Submission process status
• Quality checks before valid publication

Registered by

Aldeguer-Riquelme, Borja about 2 years ago

Submitted by

Aldeguer-Riquelme, Borja almost 2 years ago

Curators

• Rodriguez-R, Luis M
• Chuvochina, Maria

Endorsed by

Chuvochina, Maria over 1 year ago

Validated by

Chuvochina, Maria over 1 year ago

Date of priority

2023-06-23 07:38 AM (UTC)