Intestinicoccus colisanansTs


Citation

Formal styling
Intestinicoccus colisanansTs Zhou et al., 2023
Effective publication
Zhou et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tpd6ryk0 (validated)
Canonical URL
https://seqco.de/i:32228

Nomenclature

Rank
Species
Syllabication
co.li.sa'nans
Etymology
L. neut. n. colon, great gut, colon; L. part. adj. sanans, healing; N.L. part. adj. colisanans, colon-healing
Nomenclatural type
NCBI Assembly: GCA_021029595.1
Reference strain
MH27-2
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Intestinicoccus colisanans strain MH27-2 was recovered from faeces collected from a healthy human donor. The strain formed raised creamy white/milky colonies with an entire margin on agar and was observed as Gram-variable coccoid/ovoid cells that were often present as pairs or short chains. The gene repertoire of Intestinicoccus colisanans indicate it is likely a saccharolytic gut bacterium.
Classification
Bacteria » Bacillota » Clostridia » “Oscillospirales” » “Acutalibacteraceae” » Intestinicoccus » Intestinicoccus colisanansTs
Parent
Intestinicoccus
Alternative placements
Taxonomic status
Synonym
Correct name
Hominenteromicrobium mulierisT

Genomics

Accession
NCBI Assembly:GCA_021029595.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.66%
  • Contamination: 0.0%
  • Quality: 98.66
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
312.9 ×
Source
Other features
  • G+C Content: 52.55%
  • Coding Density: 88.15%
  • Codon Table: 11
  • N50: 454,909 bp
  • Contigs: 25
  • Largest Contig: 747,301 bp
  • Assembly Length: 2,969,717 bp
  • Ambiguous Assembly Fraction: 0.0002%
Submitter comments
Completeness and contaminated were evaluated by CheckM v1.0.18.
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chuvochina, Maria about 1 year ago
Submitted by
Chuvochina, Maria about 1 year ago
Curators
Endorsed by
Palmer, Marike 9 months ago
Validated by
Palmer, Marike 9 months ago
Date of priority
2023-10-09 09:21 PM (UTC)

Publications
1

Citation Title
Zhou et al., 2023, BMC Research Notes Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
Effective publication



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