Methanocatella thaueri

Citation

Formal styling

Methanocatella thaueri Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32437

Nomenclature

Rank

Species

Syllabication

thau'er.i

Etymology

N.L. gen. masc. n. thaueri, of Thauer, named in honor of Rudolf K. Thauer for his fundamental contributions to the delineation of the biochemistry of methanogenesis

Nomenclatural type

NCBI Assembly: GCF_003111625.1

Reference strain

DSM 11995

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Coccobacillus, with slightly tapered ends, about 0.5 µm in width and 0.6–1.2 µm in length, occurring in pairs and short chains. Some chains may have elongat- ed cells. Gram-positive reaction. Cell walls are composed of pseudomurein. Cells are resistant to lysis by SDS. Optimum temperature 37 °C. Optimum pH 7 (as in Miller, Lin, 2002). The G+C content of the type genome is 36.9 mol%, and the genome size is 2.24 Mbp. 

Classification

Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanocatella » Methanocatella thaueri

Parent

Methanocatella

Alternative placements

• Methanobrevibacter assigned in Miller, Lin, 2002

Genomics

Accession

NCBI Assembly:GCF_003111625.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 98.4%
• Contamination: 0.0%
• Quality: 98.4

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

144.0 ×

Source

• BioSample: SAMN06461352

Other features

• G+C Content: 36.87%
• Coding Density: 90.0%
• Codon Table: 11
• N50: 178,217 bp
• Contigs: 43
• Largest Contig: 244,212 bp
• Assembly Length: 2,243,115 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Methanobrevibacter thaueri

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCF_003111625.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanocatella thaueri (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 4 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii about 1 year ago

Submitted by

Protasov, Evgenii 5 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 4 months ago

Date of priority

2024-04-16 06:48 PM (UTC)