Methanocatella woesei

Citation

Formal styling

Methanocatella woesei Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32438

Nomenclature

Rank

Species

Syllabication

woe'se.i

Etymology

N.L. gen. masc. n. woesei, of Woese, named in honor of Carl R. Woese for his pioneering contributions to the understanding of the phylogeny of methanogens and other microorganisms

Nomenclatural type

NCBI Assembly: GCF_003111605.1

Reference strain

DSM 11979

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Coccobacillus with slightly tapered or rounded ends, about 0.6 µm in width and 1.0 µm in length, occurring in pairs or short chains. Gram-positive reaction. Cell walls are composed of pseudomurein. Cells are resistant to lysis by SDS. Optimum temperature 37 °C. Optimum pH 7 (as in Miller, Lin, 2002). The G+C content of the type genome is 29.9 mol%, and the genome size is 1.54 Mbp. 

Classification

Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanocatella » Methanocatella woesei

Parent

Methanocatella

Alternative placements

• Methanobrevibacter assigned in Miller, Lin, 2002

Genomics

Accession

NCBI Assembly:GCF_003111605.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

100.0 ×

Source

• BioSample: SAMN06461353

Other features

• G+C Content: 29.9%
• Coding Density: 90.11%
• Codon Table: 11
• N50: 240,239 bp
• Contigs: 12
• Largest Contig: 716,192 bp
• Assembly Length: 1,543,150 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Methanobrevibacter woesei

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCF_003111605.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanocatella woesei (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 6 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii over 1 year ago

Submitted by

Protasov, Evgenii 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 7 months ago

Date of priority

2024-04-16 06:48 PM (UTC)