Methanofrustulum fimipullorum^Ts

Citation

Formal styling

Methanofrustulum fimipullorum^Ts Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32515

Nomenclature

Rank

Species

Syllabication

fi.mi.pul.lo'rum

Etymology

L. neut. n. fimus, dung, excrement; L. masc. n. pullus, chicken; N.L. gen. pl. masc. n. fimipullorum, of chicken dung; denoting the putative origin from chicken manure

Nomenclatural type

NCBI Assembly: GCA_012518265.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species identified by metagenomic analyses. The G+C content of the type genome is 42.9%, and the estimated genome size is 1.93 Mbp.

Classification

Archaea » Methanobacteriota » “Methanomicrobia” » Methanosarcinales » Methanosarcinaceae » Methanofrustulum » Methanofrustulum fimipullorum^Ts

Parent

Methanofrustulum

Genomics

Accession

NCBI Assembly:GCA_012518265.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 90.85%
• Contamination: 0.65%
• Quality: 87.6

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 19 amino acids

Sequencing depth

249.7 ×

Source

• BioSample: SAMN13894220
• And 8 more…

Other features

• G+C Content: 34.39%
• Coding Density: 81.86%
• Codon Table: 11
• N50: 24,552 bp
• Contigs: 108
• Largest Contig: 77,229 bp
• Assembly Length: 1,513,574 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified 4 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_012518265.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanofrustulum fimipullorum (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 5 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii about 1 year ago

Submitted by

Protasov, Evgenii 7 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 6 months ago

Date of priority

2024-04-16 06:48 PM (UTC)