Bathycorpusculum acetigenes^Ts

Citation

Formal styling

Bathycorpusculum acetigenes^Ts Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Cannonical URL

https://seqco.de/i:32519

Nomenclature

Rank

Species

Syllabication

a.ce.ti'ge.nes

Etymology

L. neut. n. acetum, vinegar; Gr. suff. -genes, to produce; N.L. part. adj. acetigenes, vinegar- or acetic acid producing

Nomenclatural type

NCBI Assembly: GCA_009781675.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species identified by metagenomic analyses. The G+C content of the type genome is 43.4mol%, and the estimated genome size is 2.15Mbp.

Classification

Archaea » “Bathyarchaeota” » Bathyarchaeia » Bathyarchaeales » Bathycorpusculaceae » Bathycorpusculum » Bathycorpusculum acetigenes^Ts

Parent

Bathycorpusculum

Genomics

Accession

NCBI Assembly:GCA_009781675.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.07%
• Contamination: 1.87%
• Quality: 89.72

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 32.0%)
• 0 23S rRNAs
• tRNAs for 18 amino acids

Sequencing depth

22.0 ×

Source

• BioSample: SAMN12581717
• BioSample: SAMN13139693

Other features

• G+C Content: 43.42%
• Coding Density: 82.81%
• Codon Table: 11
• N50: 22,817 bp
• Contigs: 140
• Largest Contig: 148,276 bp
• Assembly Length: 2,139,595 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs. 

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCA_009781675.1

Search sequences

• NCBI Nucleotide

Local history

• This name was last modified 20 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii 10 months ago

Submitted by

Protasov, Evgenii 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 28 days ago

Date of priority

2024-04-16 06:48 PM (UTC)