Poriferihabitans thioversatilisTs


Citation

Formal styling
Poriferihabitans thioversatilisTs Nguyen et al., 2023 (valid 2024)
Effective publication
Nguyen et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:44vcemye (validated)
Cannonical URL
https://seqco.de/i:32592

Nomenclature

Rank
Species
Syllabication
thi.o.ver.sa.ti'lis
Etymology
Gr. neut. n. theîon, sulphur; L. fem. adj. versatilis, versatile; N.L. fem. adj. thioversatilis, versatile sulfur metabolism
Nomenclatural type
NCBI Assembly: GCA_028285795.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A sponge symbiont with a versatile sulfur metabolism
Notes
The calculated completeness of the type genome has been deemed an underestimation on the basis of its biology.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Arenicellales » Poriferihabitantaceae » Poriferihabitans » Poriferihabitans thioversatilisTs
Parent
Poriferihabitans gtdb

Genomics

Accession
NCBI Assembly:GCA_028285795.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 83.84%
  • Contamination: 0.61%
  • Quality: 80.79
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
12.0 ×
Source
See all sources
Other features
  • G+C Content: 50.95%
  • Coding Density: 86.37%
  • Codon Table: 11
  • N50: 17,147 bp
  • Contigs: 223
  • Largest Contig: 73,931 bp
  • Assembly Length: 2,569,092 bp
  • Ambiguous Assembly Fraction: 0.00097%
Submitter comments
Completeness was estimated with CheckM, which like underestimates for divergent, symbiont clades
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Thomas, Torsten 9 months ago
Submitted by
Thomas, Torsten 5 months ago
Curators
Endorsed by
Palmer, Marike 4 months ago
Validated by
Palmer, Marike 4 months ago
Date of priority
2024-02-01 10:13 PM (UTC)

Publications
1

Citation Title
Nguyen et al., 2023, Systematic and Applied Microbiology Functional characterization and taxonomic classification of novel gammaproteobacterial diversity in sponges
Effective publication



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