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Methanimicrococcus odontotermitis

Citation

Formal styling
Methanimicrococcus odontotermitis Protasov et al., 2023 (valid 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32598

Nomenclature

Rank
Species
Syllabication
o.don.to.ter'mi.tis
Etymology
N.L. gen. masc. n. odontotermitis, referring to Odontotermes, the host genus
Nomenclatural type
NCBI Assembly: GCA_031286065.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 43.8%, and the estimated genome size is 1.88 Mbp.
Classification
Archaea » Methanobacteriota » “Methanomicrobia” » Methanosarcinales » Methanosarcinaceae » Methanimicrococcus » Methanimicrococcus odontotermitis
Parent
Methanimicrococcus

Genomics

Accession
NCBI Assembly:GCA_031286065.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.8%
  • Contamination: 0.7%
  • Quality: 89.3
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
93.0 ×
Source
Other features
  • G+C Content: 43.8%
  • Coding Density: 84.62%
  • Codon Table: 11
  • N50: 46,552 bp
  • Contigs: 59
  • Largest Contig: 142,782 bp
  • Assembly Length: 1,747,773 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii about 1 year ago
Submitted by
Protasov, Evgenii 5 months ago
Curators
Validated by
Rodriguez-R, Luis M 4 months ago
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


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