Tiamatella incendiivivensTs


Citation

Formal styling
Tiamatella incendiivivensTs St. John, Reysenbach, 2024
Effective publication
St. John, Reysenbach, 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kxlu-6m0 (validated)
Cannonical URL
https://seqco.de/i:32611

Nomenclature

Rank
Species
Syllabication
in.cen.di.i.vi'vens
Etymology
L. neut. n. incendium, fire; L. pres. part. vivens, living; N.L. fem. adj. incendiivivens, living in or near the fire, referring to the active volcanic environment of Lower Cone, Brothers volcano
Nomenclatural type
NCBI Assembly: GCA_015522635.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The MAG representing this species was obtained from a sample from the Lower Cone of the deep-sea Brothers volcano along the Kermadec arc. The genome consists of 27 contigs, totaling 1,454,292 bp in length, and has a GC content of 41.6%. Based on CheckM2, the MAG is approximately 95.79% complete with 1.74% contamination. It encodes a complete 16S rRNA gene and tRNA genes for 19 standard amino acids. Phylogenomic analysis places this genome within Tiamatella. Based on functional genomic analysis, this organism is likely a non-motile anaerobe that utilizes protein-rich carbon sources and may derive energy from reduction of sulfur, polysulfides, thiosulfate or selenite. It is predicted to be a hyperthermophile, growing best at approximately 80°C. 
Classification
Archaea » Thermoproteota » Thermoprotei » Acidilobales » Acidilobaceae » Tiamatella » Tiamatella incendiivivensTs
Parent
Tiamatella

Genomics

Accession
NCBI Assembly:GCA_015522635.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.79%
  • Contamination: 1.74%
  • Quality: 87.09
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 6.0%)
  • tRNAs for 19 amino acids
Sequencing depth
41.93 ×
Source
Other features
  • G+C Content: 41.6%
  • Coding Density: 90.97%
  • Codon Table: 11
  • N50: 199,676 bp
  • Contigs: 27
  • Largest Contig: 389,289 bp
  • Assembly Length: 1,454,292 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completion and contamination were estimated using CheckM2. RNAs were detected with the Prokaryotic Genome Annotation Pipeline (PGAP). Completion of the 23S rRNA gene fragment (190 bp) was estimated using 23S rRNA genes from Aeropyrum pernix and Aeropyrum camini.
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
St. John, Emily 10 months ago
Submitted by
St. John, Emily 3 months ago
Curators
Endorsed by
Palmer, Marike 3 months ago
Validated by
Palmer, Marike about 1 month ago
Date of priority
2024-05-07 08:34 PM (UTC)

Publications
1

Citation Title
St. John, Reysenbach, 2024, Systematic and Applied Microbiology Genomic comparison of deep-sea hydrothermal genera related to Aeropyrum, Thermodiscus and Caldisphaera, and proposed emended description of the family Acidilobaceae
Effective publication



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