Erabacter solicola^Ts

Citation

Formal styling

Erabacter solicola^Ts Ji et al., 2021 (valid 2024)

Effective publication

Ji et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tgimo_87 (validated)

Canonical URL

https://seqco.de/i:43330

Nomenclature

Rank

Species

Syllabication

so.li.co'la

Etymology

L. neut. n. solum, soil; L. masc. / fem. suff. -cola, inhabitant, dweller; N.L. masc. n. solicola, inhabitant of the soil

Nomenclatural type

NCBI Assembly: GCA_003136895.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Obligate heterotroph. Organic substrates include peptides, amino acids, carboxylates, sarcosine, poly- and oligosaccharides, sugars. PHA storage. Also defined based on ANI, and phylogenies of 16S rRNA gene, 15 ribosomal proteins, and the GTDB.

Classification

Bacteria » Eremiobacterota » Eremiobacteria » “Baltobacterales” » “Baltobacteraceae” » Erabacter » Erabacter solicola^Ts

Parent

Erabacter gtdb

Genomics

Accession

NCBI Assembly:GCA_003136895.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.62%
• Contamination: 0.47%
• Quality: 89.27

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 19 amino acids

Sequencing depth

12.8 ×

Source

• BioSample: SAMN08179275
• BioSample: SAMN07124958

Other features

• G+C Content: 63.5%
• Coding Density: 93.15%
• Codon Table: 11
• N50: 25,607 bp
• Contigs: 176
• Largest Contig: 70,139 bp
• Assembly Length: 2,853,405 bp
• Ambiguous Assembly Fraction: 0.04%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_003136895.1
• GTDB Tree: s__Erabacter solicola
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Erabacter solicola (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 11 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda 3 months ago

Submitted by

Ferrari, Belinda 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 11 days ago

Date of priority

2024-10-17 12:47 AM (UTC)