Tethybacter castelli^Ts

Citation

Formal styling

Tethybacter castelli^Ts corrig. Taylor et al., 2021 (priority 2024)

Effective publication

Taylor et al., 2021

Corrigendum

In SeqCode Registry from “Tethybacter castellensis” (sic)

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hcdu3qk3 (validated)

Canonical URL

https://seqco.de/i:43924

Nomenclature

Rank

Species

Syllabication

cas'tel.li

Etymology

L. gen. n. castelli, originating from a fort, referring to Bare Island at Botany Bay, NSW, Australia.

Nomenclatural type

NCBI Assembly: GCA_036679665.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Heterotrophic, symbiotic bacteria of the marine sponge Cymbastela concentrica.

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Tethybacterales » Tethybacteraceae » Tethybacter » Tethybacter castelli^Ts

Parent

Tethybacter gtdb assigned in Taylor et al., 2021

Pseudonyms

• Tethybacter castellensis (Original, corrected name)

Genomics

Accession

NCBI Assembly:GCA_036679665.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.69%
• Contamination: 0.0%
• Quality: 95.69

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

5.5 ×

Source

• BioSample: SAMN39583795
• BioSample: SAMN13301258

Other features

• G+C Content: 50.32%
• Coding Density: 92.69%
• Codon Table: 11
• N50: 44,178 bp
• Contigs: 71
• Largest Contig: 160,261 bp
• Assembly Length: 1,689,527 bp
• Ambiguous Assembly Fraction: 0.054%

Submitter comments

CheckM was employed to estimate metagenome-assembled-genome completeness and contamination using the taxon-specific workflow. IMG statistics report the number of rRNA and tRNA genes present in the assembly.

Automated checks

Complete

See additional details

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Last modified about 1 year ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_036679665.1
• GTDB Tree: s__Tethybacter castelli
• Wikispecies: Tethybacter castelli
• Wikidata: Q128788769

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified over 1 year ago
• Submission process status
• Quality checks before valid publication

Registered

Almost 2 years ago by Taylor, Jessica A.

Submitted

Almost 2 years ago by Taylor, Jessica A.

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated

Over 1 year ago by Palmer, Marike

Date of priority

2024-02-21 03:06 AM (UTC)