Porifericomes azotivorans^Ts

Citation

Formal styling

Porifericomes azotivorans^Ts Nguyen et al., 2023 (valid 2024)

Effective publication

Nguyen et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:icd0lna9 (validated)

Canonical URL

https://seqco.de/i:44959

Nomenclature

Rank

Species

Syllabication

azotivorans

Etymology

N.L. neut. n. azotum, nitrogen; L. pres. part. vorans, devouring; N.L. masc. part. adj. azotivorans, devour nitrogen

Nomenclatural type

NCBI Assembly: GCA_028817255.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

A gammaproteobacterial symbiont of a sponges. The type genome was originally recovered in Robbins et al. (2021).

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Porifericomitales » Porifericomitaceae » Porifericomes » Porifericomes azotivorans^Ts

Parent

Porifericomes gtdb assigned in Nguyen et al., 2023

Genomics

Accession

NCBI Assembly:GCA_028817255.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.2%
• Contamination: 0.04%
• Quality: 95.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 59.0%)
• 0 23S rRNAs
• tRNAs for 19 amino acids

Sequencing depth

27.1 ×

Source

• BioSample: SAMN15855651
• BioSample: SRS6086972

Other features

• G+C Content: 65.21%
• Coding Density: 89.85%
• Codon Table: 11
• N50: 11,376 bp
• Contigs: 204
• Largest Contig: 61,009 bp
• Assembly Length: 1,790,111 bp
• Ambiguous Assembly Fraction: 0.12%

Submitter comments

CheckM2 was used to estimate completeness and contaminations

Automated checks

Complete

See additional details

---

Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_028817255.1
• GTDB Tree: s__Porifericomes azotivorans
• Wikispecies: Porifericomes azotivorans (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 5 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Thomas, Torsten 7 months ago

Submitted by

Thomas, Torsten 6 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Chuvochina, Maria
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 6 months ago

Validated by

Rodriguez-R, Luis M 5 months ago

Date of priority

2024-06-18 12:11 AM (UTC)