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Methylomirabilis oxygeniiferaTs

Citation

Formal styling
Methylomirabilis oxygeniiferaTs corrig. Ettwig et al., 2010 (priority 2023)
Effective publication
Ettwig et al., 2010
Corrigendum
Oren, 2017 from “Methylomirabilis oxyfera” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:loeyelk6 (validated)
Canonical URL
https://seqco.de/i:45

Nomenclature

Rank
Species
Syllabication
o.xy.ge.ni.i.fe'ra
Etymology
N.L. fem. adj. oxygeniifera, carrying oxygen
Nomenclatural type
Genome sc|0000450 Ts
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The description is the same as given by Ettwig et al., 2010: Methane-oxidizing and nitrite-reducing bacterium of the candidate division NC10. Grows anaerobically, but produces oxygen for the aerobic oxidation of methane. Reduces nitrite to dinitrogen gas without a nitrous oxide reductase. Gram-negative rod with a diameter of 0.25–0.5 mm and a length of 0.8–1.1 mm. Mesophilic with regard to temperature and pH (enriched at 25–30 uC and pH 7–8). Slow growth (doubling time 1–2 weeks).
Classification
Bacteria » Methylomirabilota » Methylomirabilia » Methylomirabilales » Methylomirabilaceae » Methylomirabilis » Methylomirabilis oxygeniiferaTs
Parent
Methylomirabilis gtdb
Pseudonyms
  • Methylomirabilis oxyfera (Original, corrected name)

Genomics

Accession
NCBI Assembly: GCA_000091165.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.26%
  • Contamination: 2.59%
  • Quality: 83.31
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 58.58%
  • Coding Density: 88.15%
  • Codon Table: 11
  • N50: 2,752,854 bp
  • Contigs: 1
  • Largest Contig: 2,752,854 bp
  • Assembly Length: 2,752,854 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified almost 2 years ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
About 3 years ago by Chuvochina, Maria
Submitted
About 3 years ago by Chuvochina, Maria
Curators
Endorsed
About 3 years ago by Palmer, Marike
Validated
About 3 years ago by Palmer, Marike
Date of priority
2023-07-11 04:34 AM (UTC)

Publications
13

Citation Title
Wu et al., 2012, Journal of Bacteriology Ultrastructure of the Denitrifying Methanotroph “Candidatus Methylomirabilis oxyfera,” a Novel Polygon-Shaped Bacterium
Wu et al., 2011, Microbiology Physiological role of the respiratory quinol oxidase in the anaerobic nitrite-reducing methanotroph ‘Candidatus Methylomirabilis oxyfera’
Ettwig et al., 2010, Nature Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
Effective publication


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seqco.de/r:loeyelk6