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Allosphingosinicella danica

Citation

Formal styling
Allosphingosinicella danica Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:5pc-9lmc (validated)
Canonical URL
https://seqco.de/i:51603

Nomenclature

Rank
Species
Syllabication
da'ni.ca
Etymology
L. fem. adj. danica, Danish, referring to a species found in Denmark
Nomenclatural type
NCBI Assembly: GCA_963850005.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Allosphingosinicella » Allosphingosinicella danica
Parent
Allosphingosinicella

Genomics

Accession
NCBI Assembly:GCA_963850005.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.4%
  • Contamination: 0.0%
  • Quality: 93.4
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
30.6 ×
Source
Other features
  • G+C Content: 66.75%
  • Coding Density: 85.55%
  • Codon Table: 11
  • N50: 1,468,026 bp
  • Contigs: 6
  • Largest Contig: 1,575,905 bp
  • Assembly Length: 4,467,113 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 8 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
11 months ago and claimed 11 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
2 days ago by Palmer, Marike
Date of priority
2025-10-07 05:27 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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seqco.de/r:5pc-9lmc