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Allosphingosinicella europaea

Citation

Formal styling
Allosphingosinicella europaea Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:5pc-9lmc (validated)
Canonical URL
https://seqco.de/i:51654

Nomenclature

Rank
Species
Syllabication
eu.ro.pae'a
Etymology
L. fem. adj. europaea, European, referring to a species found in Europe
Nomenclatural type
NCBI Assembly: GCA_963848555.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Allosphingosinicella » Allosphingosinicella europaea
Parent
Allosphingosinicella

Genomics

Accession
NCBI Assembly:GCA_963848555.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.37%
  • Contamination: 0.71%
  • Quality: 92.82
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
40.5 ×
Source
Other features
  • G+C Content: 68.37%
  • Coding Density: 87.48%
  • Codon Table: 11
  • N50: 869,150 bp
  • Contigs: 9
  • Largest Contig: 1,447,765 bp
  • Assembly Length: 3,800,777 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
11 months ago and claimed 11 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
13 days ago by Palmer, Marike
Date of priority
2025-10-07 05:27 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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