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Pseudomonas acericola

Citation

Formal styling
Pseudomonas acericola Gupta et al., 2026
Effective publication
Gupta et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:frsgkbu1 (validated)
Canonical URL
https://seqco.de/i:55780

Nomenclature

Rank
Species
Syllabication
a.ce.ri'co.la
Etymology
L. neut. n. acer, the maple tree; L. fem. suff. -cola, dweller, inhabitant; N.L. fem. n. acericola, maple dweller
Nomenclatural type
NCBI Assembly: GCA_053456465.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Pseudomonas acericola sp. nov. is a member of the Pseudomonas fluorescens subgroup, isolated from maple sap (Acer saccharum) in Quebec, Canada. The genome size is approximately 6.18 Mbp with a GC content of 61.37%. Phylogenomic analysis places this species in a distinct clade, with ANI values below 95% and dDDH values below 70% compared to all known type strains.  Diagnostic genomic traits include: Presence of multiple nonribosomal peptide synthetase (NRPS) clusters for cyclic lipopeptides, Presence of quorum-sensing related homoserine lactone (HSL) clusters, with partial similarity to known polyketide and cepacin A clusters; Presence of a terpene and a microcin biosynthetic gene cluster; Absence of phenazine biosynthetic operons, distinguishing it from P. edsoni.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Pseudomonadaceae » Pseudomonas » Pseudomonas acericola
Parent
Pseudomonas

Genomics

Accession
NCBI Assembly:GCA_053456465.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 97.2%
  • Contamination: 0.9%
  • Quality: 92.7
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
69.4 ×
Source
Other features
  • G+C Content: 61.37%
  • Coding Density: 89.81%
  • Codon Table: 11
  • N50: 929,006 bp
  • Contigs: 17
  • Largest Contig: 1,302,145 bp
  • Assembly Length: 6,179,876 bp
  • Ambiguous Assembly Fraction: 0.0079%
Automated checks
Complete
See additional details
Last modified 3 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
5 months ago by Filteau, Marie
Submitted
22 days ago by Filteau, Marie
Curators
Validated
About 6 hours ago by Rodriguez-R, Luis M
Date of priority
2026-06-24 04:31 PM (UTC)

Publications
1

Citation Title
Gupta et al., 2026, Systematic and Applied Microbiology Genomic insights and antifungal potential of Pseudomonas species isolated from maple sap, including the novel species Pseudomonas acericola sp. nov. and Pseudomonas edsoni sp. nov
Effective publication


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seqco.de/r:frsgkbu1