JSON

Genome sc|0001464

Name

Enterococcus ikei

Database

NCBI Assembly

Accession

GCA_017316105.1

Genomics

Accession
NCBI Assembly:GCA_017316105.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 2.8%
  • Quality: 86.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
135.0 ×
Source
Other features
  • G+C Content: 35.6%
  • Coding Density: 86.39%
  • Codon Table: 11
  • N50: 97,200 bp
  • Contigs: 74
  • Largest Contig: 288,914 bp
  • Assembly Length: 3,546,883 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2016-06
Location
Not detected
Toponym
Geo Loc Name: USA
Environment
Sample Type: isolate
Isolation Source: Whole tissue homogenate
Other
Host: moth
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 10 months ago


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