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Enterococcus leclercqii

This name contravenes at least one rule from the SeqCode, and it's at risk of being rejected:
  • Missing source data: The raw sequencing data should be available in INSDC databases (e.g., Sequence Read Archive)

Citation

Formal styling
Enterococcus leclercqii Schwartzman et al., 2024
Effective publication
Schwartzman et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:csh66vwa (validated)
Canonical URL
https://seqco.de/i:32898

Nomenclature

Rank
Species
Syllabication
le.clerc'qi.i
Etymology
N.L. gen. n. leclercqii, of Leclercq, named for Roland Leclercq for his fundamental contributions to Enterococcus biology
Nomenclatural type
NCBI Assembly: GCA_009933135.1
Reference strain
Strain sc|0038698: CU9D Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Type strain isolated from chicken feces
Classification
Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus leclercqii
Parent
Enterococcus

Genomics

Accession
NCBI Assembly:GCA_009933135.1
Cultures
Strain sc|0038698
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 3.8%
  • Quality: 81.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
200.0 ×
Source
Other features
  • G+C Content: 43.77%
  • Coding Density: 83.64%
  • Codon Table: 11
  • N50: 215,275 bp
  • Contigs: 22
  • Largest Contig: 699,534 bp
  • Assembly Length: 3,181,050 bp
  • Ambiguous Assembly Fraction: 0.013%
Automated checks
Complete
See additional details
Last modified 6 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 3 years ago by Manson, Abigail
Submitted
Over 2 years ago by Manson, Abigail
Curators
Endorsed
Over 2 years ago by Palmer, Marike
Validated
Over 2 years ago by Palmer, Marike
Date of priority
2024-03-01 12:37 AM (UTC)

Publications
1

Citation Title
Schwartzman et al., 2024, Proceedings of the National Academy of Sciences Global diversity of enterococci and description of 18 previously unknown species
Effective publication


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seqco.de/r:csh66vwa