Enterococcus ikei


Citation

Formal styling
Enterococcus ikei Schwartzman et al., 2024
Effective publication
Schwartzman et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:csh66vwa (validated)
Cannonical URL
https://seqco.de/i:32888

Nomenclature

Rank
Species
Syllabication
i.ke'i
Etymology
N.L. gen. n. ikei, of Ike, named after Yasu Ike, for contributions to enterococcal biology
Nomenclatural type
NCBI Assembly: GCA_017316105.1
Reference strain
DIV0869a
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Type strain isolated from a captive moth
Classification
Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus ikei
Parent
Enterococcus gtdb

Genomics

Accession
NCBI Assembly:GCA_017316105.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 2.8%
  • Quality: 86.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
135.0 ×
Source
Other features
  • G+C Content: 35.6%
  • Coding Density: 86.39%
  • Codon Table: 11
  • N50: 97,200 bp
  • Contigs: 74
  • Largest Contig: 288,914 bp
  • Assembly Length: 3,546,883 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Manson, Abigail 8 months ago
Submitted by
Manson, Abigail 6 months ago
Curators
Endorsed by
Palmer, Marike 5 months ago
Validated by
Palmer, Marike 4 months ago
Date of priority
2024-03-01 12:37 AM (UTC)

Publications
1

Citation Title
Schwartzman et al., 2024, Proceedings of the National Academy of Sciences Global diversity of enterococci and description of 18 previously unknown species
Effective publication



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