Enterococcus ikei

Citation

Formal styling

Enterococcus ikei Schwartzman et al., 2024

Effective publication

Schwartzman et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:csh66vwa (validated)

Canonical URL

https://seqco.de/i:32888

Nomenclature

Rank

Species

Syllabication

i.ke'i

Etymology

N.L. gen. n. ikei, of Ike, named after Yasu Ike, for contributions to enterococcal biology

Nomenclatural type

NCBI Assembly: GCA_017316105.1

Reference strain

DIV0869a

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Type strain isolated from a captive moth

Classification

Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus ikei

Parent

Enterococcus gtdb

Genomics

Accession

NCBI Assembly:GCA_017316105.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 2.8%
• Quality: 86.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 18 amino acids

Sequencing depth

135.0 ×

Source

• BioSample: SAMN18075568

Other features

• G+C Content: 35.6%
• Coding Density: 86.39%
• Codon Table: 11
• N50: 97,200 bp
• Contigs: 74
• Largest Contig: 288,914 bp
• Assembly Length: 3,546,883 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_017316105.1
• GTDB Tree: s__Enterococcus ikei
• Wikispecies: Enterococcus ikei (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 10 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Manson, Abigail about 1 year ago

Submitted by

Manson, Abigail about 1 year ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 11 months ago

Validated by

Palmer, Marike 10 months ago

Date of priority

2024-03-01 12:37 AM (UTC)