Genome sc|0001586

Genomics

Accession

INSDC Nucleotide:SHNO00000000.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 97.75%
• Contamination: 1.01%
• Quality: 92.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

427.7 ×

Source

• BioSample: SAMN10929369

Other features

• G+C Content: 54.6%
• Coding Density: 88.72%
• Codon Table: 11
• N50: 3,696,012 bp
• Contigs: 9
• Largest Contig: 3,696,012 bp
• Assembly Length: 4,076,518 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN10929369

Date

Collection Date: 2009-12-29

Location

Lat Lon: 38.23 N 128.68 E

Toponym

Geo Loc Name: South Korea

Environment

Env Broad Scale: mairne coastal biomes

Env Local Scale: surface layer

Env Medium: seawater

Other

Depth: 55 m

Package

Ncbi Submission Package: MIGS.ba.water.6.0

Biosamplemodel: MIGS.ba

All retrieved samples

• SAMN10929369: MIGS Cultured Bacterial/Archaeal sample from Candidatus Marimicrobium litorale

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Metadata retrieved about 1 month ago