Marimicrobium litorale

Citation

Formal styling

Marimicrobium litorale Li et al., 2023 (valid 2024)

Effective publication

Li et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:ur0fqscc (validated)

Canonical URL

https://seqco.de/i:44047

Nomenclature

Rank

Species

Syllabication

li.to.ra'le

Etymology

L. neut. adj.   litorale, of or belonging to the seashore

Nomenclatural type

INSDC Nucleotide: SHNO00000000.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species is established on the basis of taxonomic novelty analysis, and the type material is the genome IMCC11814.

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Cellvibrionales » Halieaceae » Marimicrobium » Marimicrobium litorale

Parent

Marimicrobium

Genomics

Accession

INSDC Nucleotide:SHNO00000000.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 97.75%
• Contamination: 1.01%
• Quality: 92.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

427.7 ×

Source

• BioSample: SAMN10929369

Other features

• G+C Content: 54.6%
• Coding Density: 88.72%
• Codon Table: 11
• N50: 3,696,012 bp
• Contigs: 9
• Largest Contig: 3,696,012 bp
• Assembly Length: 4,076,518 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Marimicrobium litorale (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 9 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Li, Shanhui 10 months ago

Submitted by

Li, Shanhui 10 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 9 months ago

Date of priority

2024-03-15 09:07 PM (UTC)