JSON

Genome sc|0001587

Name

Litorirhabdus singularisTs

Database

INSDC Nucleotide

Accession

SHNN00000000.1

Genomics

Accession
INSDC Nucleotide:SHNN00000000.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 96.91%
  • Contamination: 1.52%
  • Quality: 89.31
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
260.4 ×
Source
Other features
  • G+C Content: 54.2%
  • Coding Density: 91.48%
  • Codon Table: 11
  • N50: 1,315,042 bp
  • Contigs: 20
  • Largest Contig: 1,895,525 bp
  • Assembly Length: 4,835,928 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2010-08-31
Location
Lat Lon: 38.23 N 128.69 E
Toponym
Geo Loc Name: South Korea
Environment
Env Broad Scale: mairne coastal biomes
Env Local Scale: surface layer
Env Medium: seawater
Other
Depth: 10 m
Package
Ncbi Submission Package: MIGS.ba.water.6.0
Biosamplemodel: MIGS.ba
All retrieved samples
Metadata retrieved 8 months ago


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