Carthagonibacter metallireducens^Ts

Citation

Formal styling

Carthagonibacter metallireducens^Ts Aldeguer-Riquelme et al., 2023

Effective publication

Aldeguer-Riquelme et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:0hkazsoc (validated)

Canonical URL

https://seqco.de/i:23794

Nomenclature

Rank

Species

Syllabication

me.tal.li.re.du'cens

Etymology

L. neut. n. metallum, metal; L. pres. part. reducens, leading back, bringing back and in chemistry converting to a different oxidation state; N.L. masc. part. adj. metallireducens, reducing metal

Nomenclatural type

NCBI Assembly: GCA_023554445.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Classification

Bacteria » Gemmatimonadota » Gemmatimonadetes » Palauibacterales » Palauibacteraceae » Carthagonibacter » Carthagonibacter metallireducens^Ts

Parent

Carthagonibacter gtdb

Genomics

Accession

NCBI Assembly:GCA_023554445.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.7%
• Contamination: 4.4%
• Quality: 74.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 56.0%)
• 0 23S rRNAs
• tRNAs for 18 amino acids

Source

• SRA: SRX18271261

Other features

• G+C Content: 65.49%
• Coding Density: 93.26%
• Codon Table: 11
• N50: 28,327 bp
• Contigs: 153
• Largest Contig: 129,720 bp
• Assembly Length: 2,826,554 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Genome quality has been evaluated with checkM, presence of 16S rRNA gene was checked with sortmerna and tRNA were identified using tRNAscan

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_023554445.1
• GTDB Tree: s__Carthagonibacter metallireducens
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Carthagonibacter metallireducens (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified over 1 year ago
• Submission process status
• Quality checks before valid publication

Registered by

Aldeguer-Riquelme, Borja about 2 years ago

Submitted by

Aldeguer-Riquelme, Borja almost 2 years ago

Curators

• Rodriguez-R, Luis M
• Chuvochina, Maria

Endorsed by

Chuvochina, Maria over 1 year ago

Validated by

Chuvochina, Maria over 1 year ago

Date of priority

2023-06-23 07:38 AM (UTC)